Protagonists
Konohagakure
Hokage
- Naruto Uzumaki - Second Sage of Six Paths, Jinchuriki of 8 tailed beasts, Sixth Hokage
- Tsunade - Sannin, Former Fifth Hokage, Advisor
Team Jinmu
- Tenmu Ayakawa - Main character, descendant of Madara Uchiha, The Chosen One
- Tenji Wakanabe - Twin brother and rival of Tenmu
- Asuna Inoue - Love interest of both Tenmu and Tenji
Jonin Commanders
- Sasuke Uchiha - Former international criminal, Possessor of Eternal Mangekyo Sharingan, Leader of Squad 1, Seventh Hokage
- Yamato - Wood Release user, Leader of Squad 2
- Shino Aburame - Leader of Squad 3
- Sakura Haruno - Naruto's wife, leader of Squad 4
- Kura Kobayashi - Crystal Release user, sister of Setsuna Kobayashi, Jinmu's lover
- Gin Ichimaru - ex-leader of Squad 3, double-agent
- Sosuke Aizen - ex-leader of Squad 5, leader of Arrancar Army
- Kaname Tosen - ex-leader of Squad 9, follower of Sosuke
- Jinmu Kurosaki - leader of Squad 6 and Team Jinmu, refugee from Getsugakure
- Choji Akimichi - head of Akimichi Clan, leader of Squad 13
- Kiba Inuzuka - head of inuzuka clan, leader of squad 9
- Shikamaru Nara - head of nara clan, leader of squad 8
- Neji Hyuga - leader of squad 12
- Might Guy - leader of squad 11
- Kakashi Hatake - leader of squad 7
Previous Jonin Commander
- Shizune - ex-leader of squad 4, Tsunade's attendant
- Shikaku Nara
- Inoichi Yamanaka
- Hiashi Hyuga
- Shibi Aburame
- Choza Akimichi
- Tsume Inuzuka
Jonins
- Rock Lee - jonin of Squad 11
- Ino Yamanaka
- Tenten
- Hinata Hyuga
- Konohamaru Sarutobi
- Hanabi Hyuga
- Ibiki Morino
- Sai
- Genma Shiranui
- Raido Namiashi
- Kurenai Yuhi
- Aoba Yamashiro
- Suigetsu Hozuki
- Jugo
Chunin
- Hana Inuzuka
- Ryozo Kao
- Moegi
- Udon
- Kotetsu Hagane
- Izumo Kamizuri
- Karin
Genin
- Orihime Sarutobi
Iwagakure
Tsuchikage
- Onoki
- Kurotsuchi
Jonin
- Kitsuchi
- Akatsuchi
- Ittan
- Tokutchi = Head of Explosive Corps
Chunin
- Sado Takagi = 3rd generation successor of Dust Release
Kirigakure
Mizukage
- Mei Terumi
Jonin
- Ao
- Ken Terumi
- Uryu Ishida
Seven Shinobi Swordsmen
- Chojuro
- Heiji Wataru
- Ayumi Kudou
- Toichi Shiroba
- Miwako Satou
Kumogakure
Raikage
- A
- Darui
Jonin
- Killer B
- Samui
- Omoi
- Karui
- Atsui
Chunin
- Kumoi
Sunagakure
Kazekage
- Gaara
Jonin
- Temari
- Kankuro
- Baki
- Matsuri
Chunin
- Sari
Seireitei
Leader
- Genryusai Shigekuni Yamamoto
Jonin
- Soifon
- Yoruichi Shihoin
- Kisuke Urahara
- Tessai Tsukibashi
- Rojuro Otoriboshi
- Retsu Unohana
- Shinji Hirako
- Byakuya Kuchiki
- Sajin Komamura
- Love Aikawa
- Shunsui Kyoraku
- Kensei Mugurama
- Toshiro HItsugaya
- Kenpachi Zaraki
- Mayuri Kurotsuchi
- Jushiro Ukitake
Chunin
- Chojiro Sasakibe
- Marechiyo Omaeda
- Izuru Kira
- Isane Kotetsu
- Momo Hinamori
- Renji Abarai
- Mashiro Kuna
- Tetsuzaemon Iba
- Nanao Ise
- Lisa Yadomaro
- Shuhei Hisagi
- Mashiro Kuna
- Rangiku Matsumoto
- Yachiru Kusajishi
- Ikkaku Madarame
- Yumichika Ayasegawa
- Nemu Kurotsuchi
- Hiyori Sarugaki
- Rukia Kuchiki
- Hachigen Ushoda
Land of Iron
Leader
- Mifune
Samurai
- Okisuke
- Urakaku
- Denno
Antagonists